PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00261.1.g00020.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 358aa    MW: 38509.7 Da    PI: 9.7942
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00261.1.g00020.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS32.11.5e-107715487172
                          GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetge 163
                                   +sP++ ++  +aN aI+eav  ++++H +Dfd             La+R+ +  sl++T++ +p+s     ++ +l ++ge
  Zjn_sc00261.1.g00020.1.am.mk  77 ASPCFHLALHAANVAIVEAVGDHRAIHLVDFDY------------LADRRVPGTSLKVTTITDPSSPfaqsQTATLPAVGE 145
                                   79*****************************95............9*****************998889999999****** PP

                          GRAS 164 rLakfAeel 172
                                   rL+k+A+++
  Zjn_sc00261.1.g00020.1.am.mk 146 RLKKLADRV 154
                                   ******975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035145.2E-877154IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MSASNLPAAA QLSRRRPGSL SCIPAASPRR QLLILTPALQ SSSLQWRRRP GPICAATHGA  60
GLRAESSVGL AALTAPASPC FHLALHAANV AIVEAVGDHR AIHLVDFDYL ADRRVPGTSL  120
KVTTITDPSS PFAQSQTATL PAVGERLKKL ADRVARRANV PPDEAEQIRM AIKESLRDIG  180
FKDCSSTPFS RESGSSPPIV LDEYDDGDDD WTAPGSFLID ELQMEEEEVS MLSLVTSMVM  240
LELAAVVPKV LQPARPRRPR SQRQSTGSYF TRSPSAPAHT PLKNRNHTST LIGYFATVAS  300
TFGDEAVRRM QCQRRRAAAR VGDRRLGAAT RVATYGSGAG AATSAVRLHQ GEICGWQI